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https://gitlab.com/signalytic/client-external/streamline/streamline-emr.git
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Build modified streamline images
The official image from streamline does not currently work for the arm64 platform. As a temporary measure, the source code and docker build scripts have been lifted from the official images and are used to build locally. Some additional modifications are made to reduce overall image size, these are documented in docker/README.md
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<?php
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namespace Database\Seeders;
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use Illuminate\Database\Seeder;
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use Streamline\Models\InvestigationSpecialisedVariable;
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class SpecializedInvestigationVariablesSeeder extends Seeder {
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/**
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* Run the database seeders.
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*
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* @return void
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*/
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public function run() {
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$variables = [
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['name'=>'Appearance', 'investigation_id'=>'192', 'units'=>'', 'normal_ranges'=>''],
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['name'=>'Microscopy', 'investigation_id'=>'192', 'units'=>'', 'normal_ranges'=>''],
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['name'=>'Appearance', 'investigation_id'=>'221', 'units'=>'', 'normal_ranges'=>''],
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['name'=>'Rivalta\'s Test', 'investigation_id'=>'221', 'units'=>'', 'normal_ranges'=>''],
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['name'=>'Specific Gravity', 'investigation_id'=>'221', 'units'=>'', 'normal_ranges'=>''],
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['name'=>'pH', 'investigation_id'=>'221', 'units'=>'', 'normal_ranges'=>''],
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['name'=>'LDH', 'investigation_id'=>'221', 'units'=>'14', 'normal_ranges'=>'>=200 - <=200'],
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['name'=>'Protein', 'investigation_id'=>'221', 'units'=>'15', 'normal_ranges'=>'0.3 - 3.0'],
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['name'=>'Albumin', 'investigation_id'=>'221', 'units'=>'15', 'normal_ranges'=>'0.2 - 1.1'],
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['name'=>'Amylase', 'investigation_id'=>'221', 'units'=>'16', 'normal_ranges'=>'0 - 48'],
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['name'=>'Cell Count', 'investigation_id'=>'221', 'units'=>'', 'normal_ranges'=>''],
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['name'=>'Gram', 'investigation_id'=>'221', 'units'=>'', 'normal_ranges'=>''],
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['name'=>'ZN Stain', 'investigation_id'=>'221', 'units'=>'', 'normal_ranges'=>''],
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['name'=>'Appearance', 'investigation_id'=>'185', 'units'=>'', 'normal_ranges'=>''],
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['name'=>'Microscopy', 'investigation_id'=>'185', 'units'=>'', 'normal_ranges'=>''],
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['name'=>'Blood', 'investigation_id'=>'186', 'units'=>'18', 'normal_ranges'=>''],
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['name'=>'Bilirubin', 'investigation_id'=>'186', 'units'=>'17', 'normal_ranges'=>''],
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['name'=>'Urobilinogen', 'investigation_id'=>'186', 'units'=>'17', 'normal_ranges'=>'0.1 - 1'],
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['name'=>'Ketones', 'investigation_id'=>'186', 'units'=>'17', 'normal_ranges'=>''],
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['name'=>'Protein', 'investigation_id'=>'186', 'units'=>'17', 'normal_ranges'=>'0 - 20'],
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['name'=>'Nitrite', 'investigation_id'=>'186', 'units'=>'', 'normal_ranges'=>''],
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['name'=>'Glucose', 'investigation_id'=>'186', 'units'=>'19', 'normal_ranges'=>'0 - 30'],
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['name'=>'pH', 'investigation_id'=>'186', 'units'=>'', 'normal_ranges'=>'5 - 8'],
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['name'=>'Special Gravity', 'investigation_id'=>'186', 'units'=>'', 'normal_ranges'=>'1.003 - 1.029'],
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['name'=>'Leucocytes', 'investigation_id'=>'186', 'units'=>'20', 'normal_ranges'=>''],
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['name'=>'WBC', 'investigation_id'=>'132', 'units'=>'21', 'normal_ranges'=>'4.0 - 10.90'],
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['name'=>'NEU', 'investigation_id'=>'132', 'units'=>'21', 'normal_ranges'=>'2.0 - 7.8'],
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['name'=>'NUET%', 'investigation_id'=>'132', 'units'=>'22', 'normal_ranges'=>''],
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['name'=>'LYM', 'investigation_id'=>'132', 'units'=>'21', 'normal_ranges'=>'0.6 - 4.10'],
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['name'=>'LYM%', 'investigation_id'=>'132', 'units'=>'22', 'normal_ranges'=>''],
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['name'=>'MONO', 'investigation_id'=>'132', 'units'=>'21', 'normal_ranges'=>'0 - 1.8'],
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['name'=>'MONO%', 'investigation_id'=>'132', 'units'=>'22', 'normal_ranges'=>''],
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['name'=>'EOS', 'investigation_id'=>'132', 'units'=>'21', 'normal_ranges'=>'0 - 0.5'],
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['name'=>'EOS%', 'investigation_id'=>'132', 'units'=>'22', 'normal_ranges'=>''],
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['name'=>'BASO', 'investigation_id'=>'132', 'units'=>'21', 'normal_ranges'=>'0 - 0.3'],
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['name'=>'BASO%', 'investigation_id'=>'132', 'units'=>'22', 'normal_ranges'=>''],
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['name'=>'RBC', 'investigation_id'=>'132', 'units'=>'25', 'normal_ranges'=>'4.2 - 6.30'],
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['name'=>'HGB', 'investigation_id'=>'132', 'units'=>'15', 'normal_ranges'=>'12.0 - 18.0'],
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['name'=>'HCT', 'investigation_id'=>'132', 'units'=>'22', 'normal_ranges'=>'37 - 51'],
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['name'=>'MCV', 'investigation_id'=>'132', 'units'=>'23', 'normal_ranges'=>'70 - 97'],
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['name'=>'MCH', 'investigation_id'=>'132', 'units'=>'24', 'normal_ranges'=>'26 - 32'],
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['name'=>'MCHC', 'investigation_id'=>'132', 'units'=>'15', 'normal_ranges'=>'31 - 36'],
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['name'=>'RDW', 'investigation_id'=>'132', 'units'=>'22', 'normal_ranges'=>'10 - 20'],
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['name'=>'PLT', 'investigation_id'=>'132', 'units'=>'21', 'normal_ranges'=>'140 - 440'],
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['name'=>'MPV', 'investigation_id'=>'132', 'units'=>'23', 'normal_ranges'=>'3.8 - 12'],
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['name'=>'Culture', 'investigation_id'=>'203', 'units'=>'', 'normal_ranges'=>''],
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['name'=>'Sensitive To', 'investigation_id'=>'203', 'units'=>'', 'normal_ranges'=>''],
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['name'=>'Intermediate To', 'investigation_id'=>'203', 'units'=>'', 'normal_ranges'=>''],
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['name'=>'Resistant To', 'investigation_id'=>'203', 'units'=>'', 'normal_ranges'=>''],
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['name'=>'Culture', 'investigation_id'=>'204', 'units'=>'', 'normal_ranges'=>''],
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['name'=>'Sensitive To', 'investigation_id'=>'204', 'units'=>'', 'normal_ranges'=>''],
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['name'=>'Intermediate To', 'investigation_id'=>'204', 'units'=>'', 'normal_ranges'=>''],
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['name'=>'Resistant To', 'investigation_id'=>'204', 'units'=>'', 'normal_ranges'=>''],
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['name'=>'Culture', 'investigation_id'=>'205', 'units'=>'', 'normal_ranges'=>''],
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['name'=>'Sensitive To', 'investigation_id'=>'205', 'units'=>'', 'normal_ranges'=>''],
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['name'=>'Intermediate To', 'investigation_id'=>'205', 'units'=>'', 'normal_ranges'=>''],
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['name'=>'Resistant To', 'investigation_id'=>'205', 'units'=>'', 'normal_ranges'=>''],
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['name'=>'Culture', 'investigation_id'=>'206', 'units'=>'', 'normal_ranges'=>''],
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['name'=>'Sensitive To', 'investigation_id'=>'206', 'units'=>'', 'normal_ranges'=>''],
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['name'=>'Intermediate To', 'investigation_id'=>'206', 'units'=>'', 'normal_ranges'=>''],
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['name'=>'Resistant To', 'investigation_id'=>'206', 'units'=>'', 'normal_ranges'=>''],
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['name'=>'Culture', 'investigation_id'=>'207', 'units'=>'', 'normal_ranges'=>''],
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['name'=>'Sensitive To', 'investigation_id'=>'207', 'units'=>'', 'normal_ranges'=>''],
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['name'=>'Intermediate To', 'investigation_id'=>'207', 'units'=>'', 'normal_ranges'=>''],
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['name'=>'Resistant To', 'investigation_id'=>'207', 'units'=>'', 'normal_ranges'=>''],
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['name'=>'Culture', 'investigation_id'=>'208', 'units'=>'', 'normal_ranges'=>''],
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['name'=>'Sensitive To', 'investigation_id'=>'208', 'units'=>'', 'normal_ranges'=>''],
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['name'=>'Intermediate To', 'investigation_id'=>'208', 'units'=>'', 'normal_ranges'=>''],
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['name'=>'Resistant To', 'investigation_id'=>'208', 'units'=>'', 'normal_ranges'=>''],
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['name'=>'Culture', 'investigation_id'=>'209', 'units'=>'', 'normal_ranges'=>''],
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['name'=>'Sensitive To', 'investigation_id'=>'209', 'units'=>'', 'normal_ranges'=>''],
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['name'=>'Intermediate To', 'investigation_id'=>'209', 'units'=>'', 'normal_ranges'=>''],
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['name'=>'Resistant To', 'investigation_id'=>'209', 'units'=>'', 'normal_ranges'=>''],
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['name'=>'Specimen', 'investigation_id'=>'225', 'units'=>'', 'normal_ranges'=>''],
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['name'=>'Volume', 'investigation_id'=>'225', 'units'=>'4', 'normal_ranges'=>'2 - 5'],
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['name'=>'Semen Appearance', 'investigation_id'=>'225', 'units'=>'', 'normal_ranges'=>''],
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['name'=>'Viscosity', 'investigation_id'=>'225', 'units'=>'', 'normal_ranges'=>''],
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['name'=>'Semen pH', 'investigation_id'=>'225', 'units'=>'', 'normal_ranges'=>'7.2 - 8.0'],
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['name'=>'Motility 1st hr', 'investigation_id'=>'225', 'units'=>'22', 'normal_ranges'=>''],
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['name'=>'Fast & Progressive', 'investigation_id'=>'225', 'units'=>'22', 'normal_ranges'=>'32 - 100'],
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['name'=>'Slow & Progressive', 'investigation_id'=>'225', 'units'=>'22', 'normal_ranges'=>''],
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['name'=>'Non Progressive', 'investigation_id'=>'225', 'units'=>'22', 'normal_ranges'=>''],
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['name'=>'Non Motile', 'investigation_id'=>'225', 'units'=>'22', 'normal_ranges'=>''],
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['name'=>'Motility 2nd hr', 'investigation_id'=>'225', 'units'=>'22', 'normal_ranges'=>''],
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['name'=>'Fast & Progressive', 'investigation_id'=>'225', 'units'=>'22', 'normal_ranges'=>''],
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['name'=>'Slow & Progressive', 'investigation_id'=>'225', 'units'=>'22', 'normal_ranges'=>''],
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['name'=>'Non Progressive', 'investigation_id'=>'225', 'units'=>'22', 'normal_ranges'=>''],
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['name'=>'Non Motile', 'investigation_id'=>'225', 'units'=>'22', 'normal_ranges'=>''],
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['name'=>'Sperm Concentration', 'investigation_id'=>'225', 'units'=>'26', 'normal_ranges'=>'15 - 213'],
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['name'=>'Total sperm concentration', 'investigation_id'=>'225', 'units'=>'27', 'normal_ranges'=>'21 - 807'],
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['name'=>'Normal sperm morphology', 'investigation_id'=>'225', 'units'=>'22', 'normal_ranges'=>'40 - 100'],
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['name'=>'Total no. normal spermatozoa/ejaculate', 'investigation_id'=>'225', 'units'=>'28', 'normal_ranges'=>'20 - 807'],
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['name'=>'% Head abnormality', 'investigation_id'=>'225', 'units'=>'22', 'normal_ranges'=>''],
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['name'=>'Sperm head abnormality description', 'investigation_id'=>'225', 'units'=>'', 'normal_ranges'=>''],
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['name'=>'% sperm middle piece abnormality', 'investigation_id'=>'225', 'units'=>'22', 'normal_ranges'=>''],
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['name'=>'Sperm middle piece abnormality description', 'investigation_id'=>'225', 'units'=>'', 'normal_ranges'=>''],
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['name'=>'% principal piece abnormality', 'investigation_id'=>'225', 'units'=>'22', 'normal_ranges'=>''],
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['name'=>'Sperm principal piece abn description', 'investigation_id'=>'225', 'units'=>'', 'normal_ranges'=>''],
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['name'=>'Sperm Gram Reaction', 'investigation_id'=>'225', 'units'=>'', 'normal_ranges'=>''],
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['name'=>'Sperm round cell concentration', 'investigation_id'=>'225', 'units'=>'', 'normal_ranges'=>'0.1 - 1.0'],
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['name'=>'Sperm total round cell/ejaculate', 'investigation_id'=>'225', 'units'=>'', 'normal_ranges'=>''],
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['name'=>'sperm aggutination', 'investigation_id'=>'225', 'units'=>'', 'normal_ranges'=>''],
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['name'=>'Days of sexual abstinence', 'investigation_id'=>'225', 'units'=>'', 'normal_ranges'=>'2.0 - 5.0'],
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['name'=>'Method of semen collection', 'investigation_id'=>'225', 'units'=>'', 'normal_ranges'=>''],
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['name'=>'Liquification', 'investigation_id'=>'225', 'units'=>'29', 'normal_ranges'=>'15 - 16'],
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['name'=>'Viability', 'investigation_id'=>'225', 'units'=>'22', 'normal_ranges'=>'60 - 100'],
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];
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foreach ($variables as $variable) {
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InvestigationSpecialisedVariable::firstOrCreate([
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"name" => $variable['name'],
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"investigation_id" => $variable['investigation_id'],
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"units" => $variable['units'],
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"normal_ranges" => $variable['normal_ranges'],
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"created_by" => 1,
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"updated_by" => 1
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]);
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}
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}
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}
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